Systems Biology

Orchard management alters citrus root and rhizosphere microbiomes with functional consequences for plant performance

Orchard management alters citrus root and rhiz...

Systems Biology
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M. Caroline Roper
3 views
SEC-seq reveals translation-focused metabolic strategies for high IgG productivity in clonal CHO cells

SEC-seq reveals translation-focused metabolic ...

Systems Biology
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librarian
4 views
Serum protein profiling reveals hallmark-level aging trajectories and strain-specific resilience in CB6F1J and C57BL/6J male mice.

Serum protein profiling reveals hallmark-level...

Systems Biology
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librarian
4 views
Mapping kidney trait heritability to individual cells reals disease-specific remodeling of genetic risk architecture

Mapping kidney trait heritability to individua...

Systems Biology
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Huiqian Hu
14 views
Opto-MDMi: a dual-lock optogenetic system for robust activation of endogenous p53

Opto-MDMi: a dual-lock optogenetic system for ...

Systems Biology
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Kazuhiro Aoki
4 views
NovoGlyco: mapping protein glycosylation in prokaryotes

NovoGlyco: mapping protein glycosylation in pr...

Systems Biology
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Dinko Soic
6 views
Targeting HIV at its core: A mathematical model for optimizing Tat Inhibitor-based therapies toward enhanced functional cure strategies

Targeting HIV at its core: A mathematical mode...

Systems Biology
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librarian
11 views
iCNG99: a validated genome-scale metabolic model of Cryptococcus neoformans strain H99

iCNG99: a validated genome-scale metabolic mod...

Systems Biology
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librarian
10 views
Equation-Based Integration of Flux Balance Analysis with Diffusion for Spatio-Temporal Simulation of Microbial Communities

Equation-Based Integration of Flux Balance Ana...

Systems Biology
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librarian
13 views
Modeling and dissecting bidirectional feedback in gene-metabolite systems using the CausalFlux method

Modeling and dissecting bidirectional feedback...

Systems Biology
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librarian
7 views
Pushing the limits of SCP: bacSCP, a proof-of-concept study to investigate heterogeneity of bacteria by single cell proteomics.

Pushing the limits of SCP: bacSCP, a proof-of-...

Systems Biology
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librarian
8 views
Antimony 3: Extending human-readable model definitions for SBML Level 3 Core and Packages

Antimony 3: Extending human-readable model def...

Systems Biology
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librarian
15 views
Cell-Type-Resolved Pseudobulk Classification Across Independent Cohorts Identifies Microglial PTPRG as a Transcriptional Hub in Alzheimer's Disease

Cell-Type-Resolved Pseudobulk Classification A...

Systems Biology
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Annikka Polster
14 views
Rhythmic gene expression and behavioral plasticity in harvester and carpenter ants

Rhythmic gene expression and behavioral plasti...

Systems Biology
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Biplabendu Das
16 views
Interplay of the ribosome A and CAR sites

Interplay of the ribosome A and CAR sites

Systems Biology
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librarian
14 views
Improved inference of multiscale sequence statistics in generative protein models

Improved inference of multiscale sequence stat...

Systems Biology
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librarian
18 views
Nonlinear mixed-effect models and tailored parametrization schemes enables integration of single cell and bulk data

Nonlinear mixed-effect models and tailored par...

Systems Biology
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Stefan Kallenberger
16 views
UQ-PhysiCell: An extensible Python framework for uncertainty quantification and model analysis in PhysiCell

UQ-PhysiCell: An extensible Python framework f...

Systems Biology
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librarian
14 views
Kinome profiling allows examination and prediction of kinase inhibitor cardiotoxicity

Kinome profiling allows examination and predic...

Systems Biology
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librarian
16 views
Bistable attractor dynamics in difficult-to-treat rheumatic disease: a multi-axis ODE framework with cross-disease transcriptomic evidence

Bistable attractor dynamics in difficult-to-tr...

Systems Biology
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Sungsoo Jung
15 views
A Unified Control of Cellular Differentiation: From Temporal Multistability to Spatial Pattern Formation in Gene Regulatory Networks

A Unified Control of Cellular Differentiation:...

Systems Biology
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librarian
25 views
Stochastic Gene Expression Model with State-Dependent Protein Activation Delay

Stochastic Gene Expression Model with State-De...

Systems Biology
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librarian
22 views
A phosphorylation switch in PAGE4 drives MED12-mutant fibroid pathogenesis

A phosphorylation switch in PAGE4 drives MED12...

Systems Biology
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Markku Varjosalo
25 views
sRQA: AN INTEGRATIVE PIPELINE FOR SYMBOLIC RECURRENCE QUANTIFICATION ANALYSIS

sRQA: AN INTEGRATIVE PIPELINE FOR SYMBOLIC REC...

Systems Biology
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Paul Curtin
27 views
OmicGlaze: Spatial Multi-Omic Mapping of Traumatic Brain Injury

OmicGlaze: Spatial Multi-Omic Mapping of Traum...

Systems Biology
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Yanxiang Deng
32 views
Equivalent fitness increase achieved by active learning-navigated habitat reconstruction and evolution-induced genome mutation

Equivalent fitness increase achieved by active...

Systems Biology
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librarian
23 views
From the lung to the muscle: Systemic insights from an integrative MultiOmics analysis of harbour porpoises in poor respiratory health

From the lung to the muscle: Systemic insights...

Systems Biology
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Eda M Dönmez
27 views
Systems analysis of ribosomal CAR-site dynamics

Systems analysis of ribosomal CAR-site dynamics

Systems Biology
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Michael Weir
22 views
Competition between mitochondrial and cytosolic ribosomes produces a bistable metabolic switch

Competition between mitochondrial and cytosoli...

Systems Biology
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librarian
26 views
Treatment of murine autoimmune myocarditis with a novel monoclonal antibody that targets multiple inflammatory pathways

Treatment of murine autoimmune myocarditis wit...

Systems Biology
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Stefano Toldo
24 views
Biological Time Equivalence in Vertebrates: Thermodynamic Framework, Comparative Tests, and Clade-Specific Deviations

Biological Time Equivalence in Vertebrates: Th...

Systems Biology
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librarian
24 views
A Cohort-Based Global Sensitivity Benchmark of MRI-Derived Whole-Heart Electromechanical Models in Healthy Hearts

A Cohort-Based Global Sensitivity Benchmark of...

Systems Biology
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Shahrokh Rahmani
29 views
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