Bioinformatics

GANGE: Achieving Sequencing Without Sequencing With Diffusion Guided Generative Genomic Transformer

GANGE: Achieving Sequencing Without Sequencing...

Bioinformatics
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librarian
2 views
cellNexus: Quality control, annotation, aggregation and analytical layers for the Human Cell Atlas data

cellNexus: Quality control, annotation, aggreg...

Bioinformatics
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librarian
1 view
Using machine learning to overcome mosquito collections missing data for malaria modeling

Using machine learning to overcome mosquito co...

Bioinformatics
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Lelys Bravo de Guenni
5 views
PathwaySeeker: Evidence-Grounded AI Reasoning over Organism-Specific Metabolic Networks

PathwaySeeker: Evidence-Grounded AI Reasoning ...

Bioinformatics
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librarian
5 views
Uncertainty-aware benchmarking reveals ambiguous transcripts in mRNA-lncRNA classification

Uncertainty-aware benchmarking reveals ambiguo...

Bioinformatics
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librarian
6 views
Active Learning for Budget-Constrained TCR--pMHC Wet-Lab Validation

Active Learning for Budget-Constrained TCR--pM...

Bioinformatics
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librarian
5 views
FairTCR: Equity-Aware TCR--pMHC Binding Prediction\\Across HLA Alleles and Cohort Strata

FairTCR: Equity-Aware TCR--pMHC Binding Predic...

Bioinformatics
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librarian
4 views
Agent-Guided De Novo Design of Nanobody Binders Against a Novel Cancer Target

Agent-Guided De Novo Design of Nanobody Binder...

Bioinformatics
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librarian
4 views
Integrating glycosylation in de novo protein design with ReGlyco Binder Design Filter

Integrating glycosylation in de novo protein d...

Bioinformatics
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librarian
5 views
Canonical self-supervised pretraining paradigm constrains the capacity of genomic language models on regulatory decoding

Canonical self-supervised pretraining paradigm...

Bioinformatics
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Yu Wang
7 views
Inferring division-associated stochasticity from time-series single-cell transcriptomes

Inferring division-associated stochasticity fr...

Bioinformatics
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librarian
5 views
ProteomeScan: A Toolkit For Target Validation By Proteome-Wide Docking And Analysis

ProteomeScan: A Toolkit For Target Validation ...

Bioinformatics
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librarian
6 views
DIOPT: the DRSC Integrative Ortholog Prediction Tool, 2026 update

DIOPT: the DRSC Integrative Ortholog Predictio...

Bioinformatics
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Norbert Perrimon
3 views
Sampling antibody conformational ensembles withABodyBuilder4-STEROIDS

Sampling antibody conformational ensembles wit...

Bioinformatics
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librarian
7 views
vcfilt: A Zero-Allocation Streaming Filter for High-Throughput VCF Processing

vcfilt: A Zero-Allocation Streaming Filter for...

Bioinformatics
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Muhammed Murshid KP
6 views
scDisent: disentangled representation learning with causal structure for multi-omic single-cell analysis

scDisent: disentangled representation learning...

Bioinformatics
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librarian
6 views
Multiscale transcriptomic organization of the human brain with DigitalBrain

Multiscale transcriptomic organization of the ...

Bioinformatics
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Meng Lu
10 views
Generative design of intrinsically disordered proteins based on conditioned protein language models: Data is the limit

Generative design of intrinsically disordered ...

Bioinformatics
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librarian
6 views
Thermoadaptation of EndoG proteins in the Xenopus frog genus

Thermoadaptation of EndoG proteins in the Xeno...

Bioinformatics
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Alexander Tokmakov
7 views
Interpretable Biological Sequence Clustering with iClust

Interpretable Biological Sequence Clustering w...

Bioinformatics
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librarian
7 views
Highly Accurate Estimation of the Fold Accuracy of Protein Structural Models

Highly Accurate Estimation of the Fold Accurac...

Bioinformatics
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librarian
5 views
LinkLlama: Enabling Large Language Model for Chemically Reasonable Linker Design

LinkLlama: Enabling Large Language Model for C...

Bioinformatics
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Teresa Head-Gordon
10 views
FlyPredictome: A structural atlas of predicted protein-protein interactions in Drosophila

FlyPredictome: A structural atlas of predicted...

Bioinformatics
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librarian
9 views
Impact of the N-glycosylation on full-length IgG2 and IgG4 antibodies: a comparative study using molecular dynamics simulations.

Impact of the N-glycosylation on full-length I...

Bioinformatics
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librarian
10 views
Testing and Estimating Causal Treatment Effect Heterogeneity in Observational Studies via Revised Deep Semiparametric Regression: A Lung Transplant Case Study

Testing and Estimating Causal Treatment Effect...

Bioinformatics
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librarian
7 views
Genomic characterization of Escherichia coli and Enterobacter hormaechei clinical isolates from a tertiary healthcare facility in Kenya

Genomic characterization of Escherichia coli a...

Bioinformatics
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librarian
8 views
Predicting Antibody Self-Association with Sequence Structure Fusion Models: The Central Role of CSI-BLI in Early Developability Screening

Predicting Antibody Self-Association with Sequ...

Bioinformatics
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Shafayat Ahmed
10 views
Beyond single markers: bacterial synergies identified by Multidimensional Feature Selection reveal conserved microbiome disease signatures

Beyond single markers: bacterial synergies ide...

Bioinformatics
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librarian
10 views
Benchmarking MSA pairing for protein-protein complex structure prediction reveals a depth-over-pairing principle

Benchmarking MSA pairing for protein-protein c...

Bioinformatics
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librarian
20 views
Differential co-localisation analysis of multi-sample and multi-condition experiments with spatialFDA

Differential co-localisation analysis of multi...

Bioinformatics
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librarian
13 views
U-Probe: universal agentic probe design for imaging-based spatial-omics

U-Probe: universal agentic probe design for im...

Bioinformatics
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librarian
14 views
Beyond Structure and Affinity: Context-Dependent Signals for de novo Binder Success

Beyond Structure and Affinity: Context-Depende...

Bioinformatics
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librarian
14 views
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